Forest diversity and environment shape how Amazon soils exchange gases

Trees in the Amazon are constantly exchanging gases with the atmosphere. But they are not alone. Under the canopy, soils and litter on the forest floor are constantly releasing and taking up important gases. They exchange carbon dioxide, methane and a wide range of other compounds. These include biogenic volatile organic compounds (BVOCs) – lightweight carbon-based molecules that influence air chemistry and climate. Despite their importance, we still know surprisingly little about BVOC and methane fluxes from soils and litter. And we know even less about how these fluxes vary across different forest types and environmental conditions in the Amazon.

To learn more, Débora Pinheiro-Oliveira and her colleagues investigated how forest diversity and environmental conditions shape the fluxes of BVOCs and methane in the soil–litter layer. To do this, they focused on three contrasting ecosystems in the central Amazon: White-sand Forest (campinarana), Upland Forest (terra firme), and Ancient River Terrace Forest. Across these environments, they used soil chambers to measure whether soils and litter released or took up gases. In addition, they investigated how this exchange related to factors such as nutrient availability, microbial activity, temperature, and moisture.

vegetation and soil samples from the three forest types (from left to right): Upland Forest (terra firme) White-sand Forest, and Ancient River Terrace Forest. The lower panels show close-up views of the soil, highlighting differences in soil characteristics across forest types.

The researchers found that gas fluxes varied strongly across forest types. White Sand Forest showed the highest and most dynamic gas fluxes, with both strong emissions and uptake of gases. Emissions were particularly high for compounds such as acetaldehyde, isoprene and methane, while other compounds, such as monoterpenes, were predominantly taken up. In contrast, Upland Forest had lower overall fluxes, with moderate emissions and uptake of gases like dimethyl sulfide, isoprene, and acetaldehyde. And the Ancient River Terrace Forest showed almost no significant fluxes at all. Statistical models revealed that soil moisture and temperature were the main drivers of these gas exchanges in the White Sand Forest, whereas soil microbial biomass was the main driver in the Upland Forest.

The image shows the chamber used to measure gas fluxes from soil-litter, while the panels below summarize the main drivers and patterns of BVOC and methane fluxes across White-Sand, Upland, and Ancient River Terrace Forests.

These results show that Amazon soils are far from uniform. Instead, forest diversity and environmental conditions create a mosaic of gas exchange processes across the region. This is important because these gases influence atmospheric chemistry and climate. Even though White Sand Forests cover only a small fraction of the Amazon basin, they can play a large role in regional BVOC and methane fluxes under certain environmental conditions. For climate models, this means that treating the Amazon as a single, uniform system risks missing important differences in how forests interact with the atmosphere. By better understanding how gas fluxes vary across forest types, scientists can improve predictions of how an increasingly variable climate—such as more intense droughts or shifts in rainfall—will affect the Amazon’s contribution to atmospheric chemistry and global warming, and how these changes may, in turn, feedback on the climate system.

Pinheiro‑Oliveira and colleagues published the study “Forest diversity and environmental factors shape contrasting soil–litter fluxes of biogenic volatile organic compounds and methane in three central Amazonian ecosystems” Open Access in the journal Biogeosciences.

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